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1.
Int J Parasitol ; 2024 Apr 03.
Artigo em Inglês | MEDLINE | ID: mdl-38575051

RESUMO

Mites of the family Syringophilidae (Acariformes: Prostigmata: Cheyletoidea) are permanent and obligatory parasites of birds. This study presents an analysis of mite material collected from 22 avian species belonging to the family Paradisaeidae (Passeriformes), revealing the presence of four mite species belonging to four genera: Syringophiloidus attenboroughi n. sp., Peristerophila regiusi n. comb., Picobia frankei, and Gunabopicobia garylarsoni. In the present work, the genus Neoperisterophila is synonymized with the genus Peristerophila. While the genera Syringophiloidus and Picobia were expectedly found on paradisaeid birds, given their prevalence in passerines, the presence of Peristerophila and Gunabopicobia was intriguing, suggesting potential host-switching events. The specificity of these mites varies, with some showing occurrence on hosts of closely related genera and others infesting phylogenetically distant hosts. Notably, the distribution of specific mite species on the Birds-of-Paradise appears to be influenced by both long coevolutionary histories and incidental contacts between often unrelated or intergeneric hybrid species of paradisaeid birds. Furthermore, our research of 104 specimens from 22 Birds-of-Paradise species shows generally low infestation rates across the studied species, suggesting a nuanced interaction between these mites and their avian hosts. Additionally, our network analysis provides a deeper understanding of these host-parasite interactions, revealing a high level of specialization and complexity in these ecological relationships.

2.
PLoS One ; 18(7): e0287261, 2023.
Artigo em Inglês | MEDLINE | ID: mdl-37436966

RESUMO

Staphylococci are a natural component of the skin microbiota of many organisms, including humans and birds. As opportunistic pathogens, they can cause a variety of infections in humans. The close contact between domestic pigeons and their owners provide an opportunity for exchange of skin-associated bacteria. In this study, 41 healthy racing pigeons were tested. Staphylococci were detected on the skin of each bird (41/41, 100%). Isolates were identified at the species level using matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS). The diversity of the Staphylococcus species was relatively high and coagulase-negative staphylococci (CoNS) were predominantly isolated. In total, ten different staphylococcal species were identified. S. lentus (19/41, 46.3%) was noted most frequently. The pigeon skin was also inhabited by S. xylosus (6/41, 14.6%), S. equorum (4/41, 9.8%), S. hyicus (3/41, 7.3%), S. intermedius (2/41, 4.9%), S. sciuri (2/41, 4.9%), S. vitulinus (2/41, 4.9%), S. lugdunensis (1/41, 2.4%), S. hominis (1/41, 2.4%), and S. auricularis (1/41, 2.4%). Our results indicate that domestic pigeons may carry pathogens with zoonotic potential. All strains were susceptible to 12 antibiotics (ciprofloxacin, clindamycin chloramphenicol, erythromycin, fosfomycin, gentamicin, levofloxacin, norfloxacin, rifampicin, tobramycin, trimethoprim/sulfamethoxazole, vancomycin) representing 8 different classes. None isolate displayed a multidrug-resistant phenotype. Resistance to tetracycline (6/41, 14.6%) and to penicillin (4/41, 9.7%) was shown. The mecA gene was not detected in the examined strains and no methicillin-resistant staphylococci were found on the skin of the healthy pigeons.


Assuntos
Columbidae , Microbiota , Humanos , Animais , Staphylococcus/genética , Antibacterianos/farmacologia , Pele
3.
Sci Rep ; 13(1): 3982, 2023 03 09.
Artigo em Inglês | MEDLINE | ID: mdl-36894580

RESUMO

The striped hyena (Hyaena hyaena) is considered "Near Threatened" globally and "Vulnerable" in the Middle East. In Israel, the species has experienced extreme population fluctuations owing to poisoning campaigns during the British Mandate (1918-1948) which were also further exacerbated by the Israeli authorities in the mid-twentieth century. We collated data from the archives of the Israel Nature and Parks Authority for the past 47 years to elucidate the temporal and geographic trends of this species. During this period we found a 68% increase in population and the estimated density is at present 2.1 individuals/100km2. This is significantly higher than all previous estimates for Israel. It appears that the major factors contributing to their phenomenal increase in number are the increase in prey availability because of the intensification of human development, preying on Bedouin livestock, the extinction of the leopard (Panthera pardus nimr), and the hunting of wild boars (Sus scorfa) and other agricultural pests in some parts of the country. Reasons should also be sought in increasing people's awareness as well as in advanced technological capabilities that have allowed an improved observation and reporting system. Future studies need to understand the effects of the large concentrations of striped hyenas on the spatial distribution and temporal activity of other sympatric wildlife to ensure the continued persistence of the wildlife guilds in the Israeli nature.


Assuntos
Hyaenidae , Panthera , Animais , Humanos , Israel , Agricultura , Oriente Médio
4.
Pharmacol Res Perspect ; 10(6): e01012, 2022 12.
Artigo em Inglês | MEDLINE | ID: mdl-36413058

RESUMO

The aim was to identify sex-specific factors linked with oral anticoagulant initiation in a cohort of patients with atrial fibrillation using administrative data from Quebec (Canada) between 2014 and 2017. Cohort entry defined as new users, that is, no claims in last 12 months, a cohort of 32 050 patients was stratified in two groups, that is, women and men. Multivariable regression models were used to identify factors of initiations for low- and standard-dose direct oral anticoagulants (DOACs) versus warfarin, and low- versus standard-dose DOACs. In both sexes, warfarin initiation decreased and DOAC initiation increased, with year of initiation as major factors of DOACs use. In 2017, the increase was of 2- to 4-fold and 3- to 8-fold for low- and standard-dose DOACs (vs. warfarin), respectively. The proportion of patients starting on a low-dose DOAC was higher in women than men. Older age for both sexes and CHADS2 score ≥2 (only women) were major factors of low-dose dabigatran and rivaroxaban versus warfarin use. The only significant factor of standard-dose DOAC versus warfarin use was age of 65-79 for women or men treated with apixaban by 1.8- and 1.4-fold, respectively. Factors that made women and men less likely to receive a standard-dose DOAC versus warfarin were higher CHADS2 (for dabigatran and rivaroxaban), HAS-BLED and frailty scores, prior coronary disease, major bleeding, and chronic kidney disease (CKD) status. The choice of a low- versus standard-dose DOAC was mainly driven by age and CKD, and higher CHADS2 score (for dabigatran and apixaban) for both sexes.


Assuntos
Fibrilação Atrial , Insuficiência Renal Crônica , Masculino , Humanos , Feminino , Fibrilação Atrial/tratamento farmacológico , Fibrilação Atrial/induzido quimicamente , Varfarina/uso terapêutico , Dabigatrana/uso terapêutico , Rivaroxabana/uso terapêutico , Administração Oral , Anticoagulantes/uso terapêutico , Hemorragia/induzido quimicamente , Hemorragia/epidemiologia , Insuficiência Renal Crônica/induzido quimicamente
5.
PLoS One ; 17(7): e0266129, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35802713

RESUMO

The earth's geomagnetic field (GMF) is known to influence the behaviour of a wide range of species, but remains one of the most enigmatic of animal senses. Animals are known to utilize the GMF for a wide range of survival capabilities such as navigation and orienteering, migration, territoriality, homing, etc. Despite a lot of study in this regard on vertebrates, little is known about the effects of GMF on felids. Hence, we analyzed the body alignment of the Indian Leopard during defecation, and walking along the trails in the Jhalana Reserve Forest in India. Using circular statistics, we found that the leopards aligned their bodies on the north-south axis during defecation (mean azimuth -176.4°), while no such preference was found when walking (mean azimuth 52.9°). Thus we prove that leopards are sensitive to the GMF during basic physiological activities and in this context show similar behaviour to other vertebrates studied to date.


Assuntos
Panthera , Animais , Florestas , Fator de Maturação da Glia , Fenômenos Magnéticos , Panthera/fisiologia , Territorialidade
6.
Animals (Basel) ; 12(10)2022 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-35625126

RESUMO

The diet and breeding success of Eagle Owls (Bubo bubo) have been suggested to vary at different latitudes. However, it is still unclear whether and how these relationships exist at lower latitudes outside of Europe. We therefore studied the diet and breeding success of Eagle Owls during four breeding seasons at 14 nests in the Judea region, Israel. Of a total of 9461 prey items were identified; mammals (N = 6896, 35 species; 72.89%, biomass 62.3%) and birds (N = 2255, 55 species, 23.83%; biomass 36.0%) predominated the prey-base. We found that the gradient of diversity of the mammalian prey decreased from west to east; and avian prey increased from east to west. The index of species diversity, H' for all prey, had no relationship with breeding success. The prey-base of the Eagle Owls helped identify the changes in geographic distributions of several species. Marbled polecat (Vormela peregusna), especially threatened, appear to be relatively abundant, as are brown rats (Ratttus norvegicus) which were previously considered to be restricted to the coastal regions. In addition to Egyptian fruit bats (Rousettus aegyptiacus), the Eagle Owls also preyed on nine different species of insectivorous bats, several of which appear to have enlarged their geographic distribution within Israel. The Eagle Owl's diet emphasizes its generalist foraging habits, but pairs may be species-specific specialists. This adaptation is especially important in a fast-developing and congested country like Israel, because a generalist hunting strategy probably allows the species to subsist in the region.

7.
Animals (Basel) ; 11(12)2021 Dec 08.
Artigo em Inglês | MEDLINE | ID: mdl-34944276

RESUMO

We studied the quill mite fauna of the family Syringophilidae, associated with bee-eaters. We examined 273 bird specimens belonging to nine closely related species of the genus Merops, representing two phylogenetic sister clades of a monophyletic group. Our examination reveals the presence of two species of the genus Peristerophila, as follows: (1) a new species Peristerophila mayri sp. n. from Merops viridis in the Philippines, M. leschenaulti in Nepal and Sri Lanka, and M. orientalis in Sri Lanka; and (2) P. meropis from M. superciliosus in Tanzania and Egypt, M. persicus in Sudan, Tanzania, Liberia, Senegal, Kenya, and D.R. Congo, M. ornatus in Papua New Guinea, M. philippinus in Thailand, Indonesia and Sri Lanka, and M. americanus in the Philippines. The prevalence of host infestations by syringophilid mites varied from 3.1 to 38.2%. The distribution of syringophilid mites corresponds with the sister clade phylogenetic relationships of the hosts, except for P. meropis associated with Merops americanus. Possible hypotheses for the host lineage shift are proposed.

8.
Animals (Basel) ; 11(12)2021 Dec 13.
Artigo em Inglês | MEDLINE | ID: mdl-34944314

RESUMO

Display, wherein males attempt to maximize fitness by attracting sexually mature females to mate, is known to drive speciation by Sexual Selection. We researched the Red Sea Ghost Crab (Ocypode saratan; RSGC), in which males build display pyramids to attract females. The study was conducted at the beach in Eilat, Israel. At each session, we measured the height (in cm) of all pyramids and the dimensions (height, breadth; in cm) of the burrow entrance. We assumed that the size of the entrance represented the relative size of the carapace width of the occupant. The mean (± SE) entrance volume was 230.8 ± 11.7 cm, and the height of the pyramid was 11.8 ± 0.49 cm (n = 54). The results of our study did not support our hypothesis because we had expected to find a linear correlation between body size and pyramid height, i.e., the larger the male, the larger the pyramid. However, our results show that the largest males in the population either built small pyramids or not at all, and the cut-off of the larger crab's body size appears to be around 350 cm3. We discovered a step-wise function in the data in that crabs with the smallest body size of ca. 250 cm3 constructed the highest pyramids, with a declining tendency between 250-350 cm3 and extremely low pyramids beyond 350 cm3. However, our findings need to be further studied with a stress on the ambiance and elucidate whether the habitats differ in temperature, humidity, prey-base, etc., before concluding as to why the larger males desist from building pyramids. This study underwrites the importance of studying the mating systems of the macro-fauna of the beaches that are fast disappearing owing to anthropogenic development.

9.
Orig Life Evol Biosph ; 51(3): 231-257, 2021 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-34363564

RESUMO

Earth is one of the inner planets of the Solar System, but - unlike the others - it has an oxidising atmosphere, relatively stable temperature, and a constant geomagnetic field (GMF). The GMF does not only protect life on Earth against the solar wind and cosmic rays, but it also shields the atmosphere itself, thus creating relatively stable environmental conditions. What is more, the GMF could have influenced the origins of life: organisms from archaea to plants and animals may have been using the GMF as a source of spatial information since the very beginning. Although the GMF is constant, it does undergo various changes, some of which, e.g. a reversal of the poles, weaken the field significantly or even lead to its short-term disappearance. This may result in considerable climatic changes and an increased frequency of mutations caused by the solar wind and cosmic radiation. This review analyses data on the influence of the GMF on different aspects of life and it also presents current knowledge in the area. In conclusion, the GMF has a positive impact on living organisms, whereas a diminishing or disappearing GMF negatively affects living organisms. The influence of the GMF may also be an important factor determining both survival of terrestrial organisms outside Earth and the emergence of life on other planets.


Assuntos
Radiação Cósmica , Planeta Terra , Animais , Atmosfera , Planetas
10.
Animals (Basel) ; 11(6)2021 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-34198631

RESUMO

As is well-known, endemic island bird species are especially vulnerable to extinction from anthropogenic environmental change and reduced fitness compared with mainland taxa. The Cyprus Scops Owl, Otus cyprius, is a recently recognized island endemic species whose ecology and breeding biology have not been studied. It nests mainly in holes in trees and buildings, so the felling of old trees, modern architectural practices, and the renovation of old houses in villages may reduce nest site availability. Its population trend is also unknown. Therefore, to better determine its ecological requirements and habitat preferences we placed nest boxes in rural areas adjacent to the forest, in the forest, and in the ecotone between them, and used breeding success as our indicator of habitat suitability. We found that breeding parameters like laying date, clutch size, length of the incubation period, hatching day, hatching success, and number of nestlings did not differ between the three habitats. Despite the low level of nest box occupancy rate (5-11%) the endemic Cyprus Scops Owl readily breeds in artificial nests. Therefore, although we are unaware of any current threats to the Cyprus Scops Owl, we recommend that its conservation be prioritized, including studies, monitoring, habitat conservation, and the provision of nest boxes.

11.
Front Zool ; 18(1): 15, 2021 Apr 01.
Artigo em Inglês | MEDLINE | ID: mdl-33794934

RESUMO

Anhydrobiosis can be described as an adaptation to lack of water that enables some organisms, including tardigrades, to survive extreme conditions, even some that do not exist on Earth. The cellular mechanisms underlying anhydrobiosis are still not completely explained including the putative contribution of mitochondrial proteins. Since mitochondrial alternative oxidase (AOX), described as a drought response element in plants, was recently proposed for various invertebrates including tardigrades, we investigated whether AOX is involved in successful anhydrobiosis of tardigrades. Milnesium inceptum was used as a model for the study. We confirmed functionality of M. inceptum AOX and estimated its contribution to the tardigrade revival after anhydrobiosis of different durations. We observed that AOX activity was particularly important for M. inceptum revival after the long-term tun stage but did not affect the rehydration stage specifically. The results may contribute to our understanding and then application of anhydrobiosis underlying mechanisms.

12.
PLoS One ; 16(3): e0246691, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33657116

RESUMO

AIM: Real-world predictors of major bleeding (MB) have been well-studied among warfarin users, but not among all direct oral anticoagulant (DOAC) users diagnosed with atrial fibrillation (AF). Thus, our goal was to build a predictive model of MB for new users of all oral anticoagulants (OAC) with AF. METHODS: We identified patients hospitalized for any cause and discharged alive in the community from 2011 to 2017 with a primary or secondary diagnosis of AF in Quebec's RAMQ and Med-Echo administrative databases. Cohort entry occurred at the first OAC claim. Patients were categorized according to OAC type. Outcomes were incident MB, gastrointestinal bleeding (GIB), non-GI extracranial bleeding (NGIB) and intracranial bleeding within 1 year of follow-up. Covariates included age, sex, co-morbidities (within 3 years before cohort entry) and medication use (within 2 weeks before cohort entry). We used logistic-LASSO and adaptive logistic-LASSO regressions to identify MB predictors among OAC users. Discrimination and calibration were assessed for each model and a global model was selected. Subgroup analyses were performed for MB subtypes and OAC types. RESULTS: Our cohort consisted of 14,741 warfarin, 3,722 dabigatran, 6,722 rivaroxaban and 11,196 apixaban users aged 70-86 years old. The important MB predictors were age, prior MB and liver disease with ORs ranging from 1.37-1.64. The final model had a c-statistic of 0.63 (95% CI 0.60-0.65) with adequate calibration. The GIB and NGIB models had similar c-statistics of 0.65 (95% CI 0.63-0.66) and 0.67 (95% CI 0.64-0.70), respectively. CONCLUSIONS: MB and MB subtype predictors were similar among DOAC and warfarin users. The predictors selected by our models and their discriminative potential are concordant with published data. Thus, these models can be useful tools for future pharmacoepidemiologic studies involving older oral anticoagulant users with AF.


Assuntos
Anticoagulantes/efeitos adversos , Fibrilação Atrial/tratamento farmacológico , Hemorragia/classificação , Hemorragia/epidemiologia , Administração Oral , Idoso , Idoso de 80 Anos ou mais , Anticoagulantes/administração & dosagem , Dabigatrana/administração & dosagem , Dabigatrana/efeitos adversos , Bases de Dados Factuais , Feminino , Hemorragia Gastrointestinal/induzido quimicamente , Hemorragia Gastrointestinal/epidemiologia , Hemorragia/induzido quimicamente , Hospitalização , Humanos , Hemorragias Intracranianas/induzido quimicamente , Hemorragias Intracranianas/epidemiologia , Masculino , Pirazóis/administração & dosagem , Pirazóis/efeitos adversos , Piridonas/administração & dosagem , Piridonas/efeitos adversos , Análise de Regressão , Rivaroxabana/administração & dosagem , Rivaroxabana/efeitos adversos , Varfarina/administração & dosagem , Varfarina/efeitos adversos
13.
Sci Total Environ ; 780: 146434, 2021 Aug 01.
Artigo em Inglês | MEDLINE | ID: mdl-33774297

RESUMO

Artificial light at night (ALAN) is currently recognised as an important environmental disturbance that influences habitats, fitness and behaviour of numerous organisms. However, its effect on bird community distribution on a large spatial scale still remains unclear. Therefore, I decided to use a predictive approach to test an assumption that artificial nightlight, as one of 73 predictors, determines taxonomic, functional and phylogenetic levels of an avian community. In order to safeguard inference from any inconsistency, I used not one but four indices describing functional diversity, two measures showing phylogenetic species richness, and one reflecting taxonomic diversity. For all these measures of species communities I developed two sets of Random Forest models: one set included ALAN as an additional predictor, while the other did not. Following cross validation tests as well as an independent evaluation of models, I demonstrated that artificial night light improved the performance of predictive models. Taxonomic species richness decreased linearly along with increasing artificial luminescence. Moreover, functional diversity showed a unimodal relation to ALAN, which meant that most niches were occupied on a moderate level of artificial lighting. Finally, phylogenetic diversity was under the highest pressure of ALAN, because even a minimal amount of artificial night lighting radically reduced this measure of biodiversity. On the basis of predictive maps, I also found that models which did not include urbanisation processes showed high values of avian biodiversity in regions where in fact they were low. Thus, I conclude that ALAN as a human footprint can play a key role when analysing the distribution of bird communities on large spatial scales.


Assuntos
Biodiversidade , Aves , Animais , Ecossistema , Geografia , Humanos , Filogenia
14.
PeerJ ; 9: e10630, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-33604170

RESUMO

The open space is a hostile environment for all lifeforms not only due to vacuum, high radiation, low atmospheric pressure, and extremely low temperature, but also the absence of the geomagnetic field. The geomagnetic field protects Earth mainly from corpuscular radiation, that is, solar wind and cosmic radiation, but above all it influences organisms, including their cells, tissues and organs. Moreover, numerous studies conducted on plants and animals confirmed that hypomagnetic conditions (the term referring to all situations when the magnetic field is weaker than the typical geomagnetic field) have significant influence on the metabolism of living organisms. Although many studies dealt with a variety of aspects related mainly to the influence of hypomagnetic conditions on human health. Very few studies have considered the influence of hypomagnetic conditions on extremophiles. Astrobiologists have long been testing different extremofiles to find out if any multicellular organisms are able to survive in extreme conditions of open space. Among all multicellular extremophiles fit for such research, water bears (Tardigrada) are the most interesting. Not only are they one of the most resistant organisms on Earth, but results obtained from studies on these invertebrates can be extrapolated or applied to vertebrates (including humans). Despite this, studies on the influence of hypomagnetic conditions on tardigrades are rare, so far. In the present study, to test the influence of hypomagnetic conditions on the process of anhydrobiosis while entering and returning from anhydrobiosis, we used two terrestrial anhydrobiotic species that are Echiniscus testudo and Milnesium inceptum. To exclude the ambient magnetic field, experiments were carried out in a special magnetic field shielding chamber. In total, three experiments were conducted: (a) tardigrades in anhydrobiosis, (b) tardigrades entering anhydrobiosis and (c) tardigrades returning to active life. The obtained results clearly showed that even partial isolation from the geomagnetic field, that is, hypomagnetic conditions, has negative influence on anhydrobiotic abilities of both tested tardigrade species. In both species we observed lower survivability rate while entering anhydrobiosis, in anhydrobiotic state and returning to the active state. What is more, we observed a higher mortality rate in Ech. testudo than Mil. inceptum which suggest that different species response to the hypomagnetic conditions in different way. In conclusion, while current knowledge on the influence of hypomagnetic conditions on mortality of invertebrates is very limited, our results suggest that the presence of the magnetic field is a very important factor which should be considered in further research focused on potential survival of Earth organisms in outer space, spacecrafts or different planets and moons.

15.
Zool Stud ; 60: e74, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-35774259

RESUMO

Water availability is one of the most important factors for terrestrial life. Terrestrial habitats may periodically become dry, which can be overcome by an organism's capability to undergo anhydrobiosis. In animals, this phenomenon has been reported for invertebrates, with tardigrades being the best-known. However, different tardigrade species appear to significantly differ in their anhydrobiotic abilities. While several studies have addressed this issue, established experimental protocols for tardigrade dehydration differ both within and among species, leading to ambiguous results. Therefore, we apply unified conditions to estimate intra-and interspecies differences in anhydrobiosis ability reflected by the return to active life. We analysed Milnesium inceptum and Ramazzottius subanomalus representing predatory and herbivorous species, respectively, and often co-occur in the same habitat. The results indicated that the carnivorous Mil. inceptum displays better anhydrobiosis survivability than the herbivorous Ram. subanomalus. This tendency to some degree coincides with the time of "waking up" since Mil. inceptum showed first movements and full activity of any first individual later than Ram. subanomalus. The movements of all individuals were however observed to be faster for Mil. inceptum. Differences between the experimental groups varying in anhydrobiosis length were also observed: the longer tun state duration, the more time was necessary to return to activity.

16.
Zootaxa ; 4878(2): zootaxa.4878.2.8, 2020 Nov 13.
Artigo em Inglês | MEDLINE | ID: mdl-33311159

RESUMO

The fauna of the quill mite genus Peristerophila Kethley, 1970 (Acariformes: Prostigmata: Syringophilidae) associated with pigeons and doves (Aves: Columbiformes) is reviewed. In our study, we examined 109 species of columbiform hosts of which 28 species belonging to nine genera were infested by Peristerophila mites. In the analyzed mite material, six species of this genus were found including two new species described herein: P. geopelis sp. nov. from Geopelia cuneata, G. placida, G. striata, as well as Ocyphaps lophotes and P. leucomela sp. nov. from Columba leucomela. Additionally, eighteen new host species and many new locality records for the previously described taxa are reported.


Assuntos
Doenças das Aves , Infestações por Ácaros , Ácaros , Animais , Columbidae , Columbiformes
17.
J Chem Phys ; 152(5): 051102, 2020 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-32035470

RESUMO

In this work, the adsorption height of Ag adatoms on the Fe3O4(001) surface after exposure to CO was determined using normal incidence x-ray standing waves. The Ag adatoms bound to CO (Ag1 CO) are found to be pulled out of the surface to an adsorption height of 1.15 Å ± 0.08 Å, compared to the previously measured height of 0.96 Å ± 0.03 Å for bare Ag adatoms and clusters. Utilizing DFT+vdW+U calculations with the substrate unit cell dimension fixed to the experimental value, the predicted adsorption height for Ag1 CO was 1.16 Å, in remarkably good agreement with the experimental results.

18.
Mol Cell Proteomics ; 19(1): 167-180, 2020 01.
Artigo em Inglês | MEDLINE | ID: mdl-31754044

RESUMO

Porphyromonas gingivalis is a key pathogen in chronic periodontitis and has recently been mechanistically linked to the development of rheumatoid arthritis via the activity of peptidyl arginine deiminase generating citrullinated epitopes in the periodontium. In this project the outer membrane vesicles (OMV) from P. gingivalis W83 wild-type (WT), a W83 knock-out mutant of peptidyl arginine deiminase (ΔPPAD), and a mutant strain expressing PPAD with the active site cysteine mutated to alanine (C351A), have been analyzed using a two-dimensional HFBA-based separation system combined with LC-MS. For optimal and positive identification and validation of citrullinated peptides and proteins, high resolution mass spectrometers and strict MS search criteria were utilized. This may have compromised the total number of identified citrullinations but increased the confidence of the validation. A new two-dimensional separation system proved to increase the strength of validation, and along with the use of an in-house build program, Citrullia, we establish a fast and easy semi-automatic (manual) validation of citrullinated peptides. For the WT OMV we identified 78 citrullinated proteins having a total of 161 citrullination sites. Notably, in keeping with the mechanism of OMV formation, the majority (51 out of 78) of citrullinated proteins were predicted to be exported via the inner membrane and to reside in the periplasm or being translocated to the bacterial surface. Citrullinated surface proteins may contribute to the pathogenesis of rheumatoid arthritis. For the C351A-OMV a single citrullination site was found and no citrullinations were identified for the ΔPPAD-OMV, thus validating the unbiased character of our method of citrullinated peptide identification.


Assuntos
Membrana Externa Bacteriana/metabolismo , Citrulinação , Vesículas Extracelulares/metabolismo , Peptídeos/metabolismo , Porphyromonas gingivalis/metabolismo , Alanina/metabolismo , Artrite Reumatoide/microbiologia , Proteínas de Bactérias/metabolismo , Domínio Catalítico , Cromatografia Líquida , Técnicas de Inativação de Genes , Humanos , Espectrometria de Massas , Proteínas de Membrana/metabolismo , Desiminases de Arginina em Proteínas/genética , Desiminases de Arginina em Proteínas/metabolismo , Proteômica/métodos
19.
Behav Processes ; 162: 162-166, 2019 May.
Artigo em Inglês | MEDLINE | ID: mdl-30885678

RESUMO

Urban and rural habitats provide different conditions to wintering birds mainly due to different access to bird feeders. Returning to the food sources, even under the stress related to trapping, could play an important role in the energetic budget of wintering birds. We studied the duration of period between the first and the second capture of the Great Tits (Parus major) caught and ringed at bird feeders. We expected that recapturing of birds, which could be connected with their experience, would depend on their sex, age and on the size of human settlements (urban vs. rural areas), which could modify the behavior of wintering birds. We found that the length of the period was the shortest for immature females and the longest for adult males (the difference being 3.8 days in average). In contrast to more experienced adults, more frequent visits in case of immature tits, which increased probability of being trapped, could be affected by their weaker condition and smaller size, which resulted in feeding whenever it was possible. At the same time we did not find any differences between urban (duration of 29.5 days in average) and rural (28.5 days) areas. Differentiation in bird densities, access to feeders and various environmental factors seems to be the reason why this issue awaits further, more detailed studies including influence of weather on the behavior of birds.


Assuntos
Ecossistema , Passeriformes , Estações do Ano , Fatores Etários , Animais , Feminino , Humanos , Masculino , População Rural , Fatores Sexuais , População Urbana
20.
Phys Chem Chem Phys ; 20(24): 16469-16476, 2018 Jun 20.
Artigo em Inglês | MEDLINE | ID: mdl-29882949

RESUMO

The normal incidence X-ray standing wave (NIXSW) technique has been used to follow the evolution of the adsorption geometry of Ni adatoms on the Fe3O4(001)-(√2 × âˆš2)R45° surface as a function of temperature. Two primary surface region sites are identified: a bulk-continuation tetrahedral site and a sub-surface octahedral site, the latter site being preferred at higher annealing temperatures. The ease of incorporation is linked to the presence of subsurface cation vacancies in the (√2 × âˆš2)R45° reconstruction and is consistent with the preference for octahedral coordination observed in the spinel compound NiFe2O4.

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